| id | 783 |
|---|---|
| protein family | MSP |
| protein name | Vo.ca-MSP-1-U |
| species name | Volvox carteri |
| seq length | 195 |
| cds location | 528274..528442,528540..528666,528996..529086,529860..530010,530928..530974 |
| secis location | 537813..537915 |
| dna sequence | ATGCCCCCGCTGGCATCTCGCCGCCGCTTAGATGCTGCACCAGCTGCGCCAGAAGCAGTCTCGCCATCAGGCGAGGCTGCGGACAAGCGCTCGCTGGCGGCATCTGTGGCAGCGTTGCTGCTGGCACTACCAGCTCTCGTGGGAAGCTGATGTTGGCCTTTGCTCCTGGCCGGATTTATGGGTATCACCGCAACGGCAGGAGCAAAGGCTTTCTCACACACATTCTCACTGGCGCTCACGTTGGCTATCCTCACCAACTTGGCCCAGTACACGGCATGGAAGTCCACGTCCCGAAGCGGCTCCCACTGGCAGCGCTACGGCCCCGCCTGGCTCCTCGTCATTGCCACTCCGTTGATGTGCGCAGATCTCGTACGGCACTGCCTGCAGGATTCTGCCATCTGGACGGGTCCCTCGAGCCGCATGTATCGGCCGCACTGCGGCCCTGTGAGCGGTTTTCACGGCTTCTGGTGTCTTTCGGTTACTGGTTGGCTCTTCTCCATCATCTTCACATACAGCGGCTTCGTTCTCATGGTGGCAGCGGTTCTTTGGAGCTCAAATCTGATCGGCAAGCTGCGGGTCGCCTGG |
| amino acid sequence | MPPLASRRRLDAAPAAPEAVSPSGEAADKRSLAASVAALLLALPALVGSUCWPLLLAGFMGITATAGAKAFSHTFSLALTLAILTNLAQYTAWKSTSRSGSHWQRYGPAWLLVIATPLMCADLVRHCLQDSAIWTGPSSRMYRPHCGPVSGFHGFWCLSVTGWLFSIIFTYSGFVLMVAAVLWSSNLIGKLRVAW |
| secis free energy | -10.59 |
| secis sequence | CAUGUUUGAU GACUAUA AUUACAGGUCUAA CUGAU ACUGAUGUUAGUU AA CCGGCGGCUUGC GACGACCGUUGGU UGAG UUCGCCA UUCAAUU GCCGCACCAG |
| est id | gi|167098892|gb|FD822479.1|FD822479,gi|167115568|gb|FD840168.1|FD840168,gi|167116764|gb|FD838153.1|FD838153,gi|167116168|gb|FD838402.1|FD838402,gi|167090292|gb|FD813436.1|FD813436,gi|167128377|gb|FD850508.1|FD850508 |
| est cds location | 203..787 |
| est secis location | |
| est dna sequence | ATGCCCCCGCTGGCATCTCGCCGCCGCTTAGATGCTGCACCAGCTGCGCCAGAAGCAGTCTCGCCATCAGGCGAGGCTGCGGACAAGCGCTCGCTGGCGGCATCTGTGGCAGCGTTGCTGCTGGCACTACCAGCTCTCGTGGGAAGCTGATGTTGGCCTTTGCTCCTGGCCGGATTTATGGGTATCACCGCAACGGCAGGAGCAAAGGCTTTCTCACACACATTCTCACTGGCGCTCACGTTGGCTATCCTCACCAACTTGGCCCAGTACACGGCATGGAAGTCCACGTCCCGAAGCGGCTCCCACTGGCAGCGCTACGGCCCCGCCTGGCTCCTCGTCATTGCCACTCCGTTGATGTGCGCAGATCTCGTACGGCACTGCCTGCAGGATTCTGCCATCTGGACGGGTCCCTCGAGCCGCATGTATCGGCCGCACTGCGGCCCTGTGAGCGGTTTTCACGGCTTCTGGTGTCTTTCGGTTACTGGTTGGCTCTTCTCCATCATCTTCACATACAGCGGCTTCGTTCTCATGGTGGCAGCGGTTCTTTGGAGCTCAAATCTGATCGGCAAGCTGCGGGTCGCCTGG ACTGGTCTGCGGAGTTGA |
| est amino acid sequence | MPPLASRRRLDAAPAAPEAVSPSGEAADKRSLAASVAALLLALPALVGSUCWPLLLAGFMGITATAGAKAFSHTFSLALTLAILTNLAQYTAWKSTSRSGSHWQRYGPAWLLVIATPLMCADLVRHCLQDSAIWTGPSSRMYRPHCGPVSGFHGFWCLSVTGWLFSIIFTYSGFVLMVAAVLWSSNLIGKLRVAW TGLRS* |
| est secis free energy | 0 |
| est secis sequence |