| id | 644 |
|---|---|
| protein family | SELENOO |
| protein name | Ph.tr-SELENOO-1-U |
| species name | Phaeodactylum tricornutum |
| seq length | 590 |
| cds location | 668587..670356 |
| secis location | 670451..670558 |
| dna sequence | CCCGATACCGACGATAATCGTACCCGGCGTCCCGTCTTTAACGGTCATTACGTCCCGGTCAAACCGACAGGGATTGCCAAACCCCGTCTCGTAATGTACAGTCCCGACATGGCGGCACAATTACAACTTACACCCGAACAGGTTGCATCGCCAGACTTTGTCGATTGGGTGTCCGGTAATACAGTCTTGGGTGAAACTTGGGCGACACCGTACGCGCTCTCCATTATGGGGACTCGCTACACCAACAACTGTCCCTACGGAACGGGCAACGGCTACGGCGATGGTCGCGCTATATCTATAGGTGAATTGCACGGTCTCGAACTTCAGCTCAAGGGTGGTGGCACCACGCCTTTTCATCGCGGTGCTGATGGCCGCGCCGTCTTGCGGTCCAGCATTCGAGAATTCCTCGCCAGCGAAGCCATGCACTCGTTGAATGTTTCGACTACCCGGGCATTGTCGTTGGTCGTCAGTGAGCTCGACACGATCTCGCGTCCTTGGTATTCGGACAATTCCGTCTTGCGCATACCAGATATGGATGATCCCCGCTTGGCTCAATACGATACGGAAGAGCGCAAACGAATCATTCAACAACTCAAGGCCCAATCCAAGGCTGATCCCAATATTATGGTCCGAGAAAAGACCGCCATTACGTGTCGTGTAGCGACCAGTTTTCTCCGCGTCGGACACCTCGATTTGTTTGCCCGTCGAGTAGAGCGCACCAGTAAAAACACCGACGGTACCTACGACACCTCCACGTTGGAGTGGAAGGAGTTGGAGGATCTCGTTTGGCATGCGTGCTATCGTGAATATCGGCACGCTGCGTACGAACCCTTTCACGAAACACGTGATATTGCCGCGGCTGCTCACGTTTTGTTGAAACAGGCCGCCGACCGCATTGCGGCCATGGTCGCCGATTGGGTCCGTGTTGGTTTCATCCAAGGCAATTTTAACGCGGACAATTGCCTCGTGGGTGGTCGCACCATGGATTACGGTCCCTTCGGCTTTCTCGAGTACTACCATCCCACGGCGGCCAAGTGGACCGGTAGTGGCGAGCATTTTGGTTTTTTGAACCAACCGTCGGCTGGCTTTGCCAATTTCAAAGTGTTGGCAGAAAGTGTGGTTCCCGTGATTGCAGCCGCCCACGGTGAACCGTCGAGTAAGATTCTAAAAAATGTTTTGGATGATGCCGCCAAAGTATTCCAAAACAAGGTAGACGAGACATTTCGGAAAAAGCTGGGTTTTACTGTCGAGCAAGATATCGGCGATGACGTTTGGGAAGCTTTGGAACCGTTGTTGCGACTTTCGCAAATTGACTGGACCCTCTTTTTCCGACAATTGACTATGCTGCTAAAGGACTTTCCCGATTTGTCGTCGGAGGACTATGTTGGAATGCTCTGCGCCTTGGAGGGGAGTGATACCGACCGCGAAGGATCAAGTCCGTTCTATGAACCATTGACGCAACAGCTTCGTGCGCGGTGGTTAACATGGATAGAGCAGTGGAGAGTTGCACTTGATGCGTGTGGATCCGATACCGATACAATTTTTGAACAGATGCGAACGACCAACCCCAAGTTTGTGCTCCGCGAGTGGATGCTAGTCGATGCGTACACAAGGGCGGCTGCCGGCGATGAATCTGACATGAGGAAGCTCTTTGAGCTGATTCAGCGGCCGTACGACGAGGGAACAAAAGATGAAATAAATCGATTTTACCGACGAGCCTCGGAAGAAGCACTTACGACCGGTGGGACCGCCTTTATGTCCTGATCCAGT |
| amino acid sequence | PDTDDNRTRRPVFNGHYVPVKPTGIAKPRLVMYSPDMAAQLQLTPEQVASPDFVDWVSGNTVLGETWATPYALSIMGTRYTNNCPYGTGNGYGDGRAISIGELHGLELQLKGGGTTPFHRGADGRAVLRSSIREFLASEAMHSLNVSTTRALSLVVSELDTISRPWYSDNSVLRIPDMDDPRLAQYDTEERKRIIQQLKAQSKADPNIMVREKTAITCRVATSFLRVGHLDLFARRVERTSKNTDGTYDTSTLEWKELEDLVWHACYREYRHAAYEPFHETRDIAAAAHVLLKQAADRIAAMVADWVRVGFIQGNFNADNCLVGGRTMDYGPFGFLEYYHPTAAKWTGSGEHFGFLNQPSAGFANFKVLAESVVPVIAAAHGEPSSKILKNVLDDAAKVFQNKVDETFRKKLGFTVEQDIGDDVWEALEPLLRLSQIDWTLFFRQLTMLLKDFPDLSSEDYVGMLCALEGSDTDREGSSPFYEPLTQQLRARWLTWIEQWRVALDACGSDTDTIFEQMRTTNPKFVLREWMLVDAYTRAAAGDESDMRKLFELIQRPYDEGTKDEINRFYRRASEEALTTGGTAFMSUSS |
| secis free energy | 0 |
| secis sequence | AAGAAGUUGC GCUUACA CAGAUCAGAGUGA AUGAA AGCAAGAGGA AA AUCCAUGUCUAAAGCGAAGAAUGAA AGCCCUUGCU CGAC CAACC UGAUAAC AACUGUGCAA |
| est id | gi|144663795|gb|CT917386.1|CT917386 |
| est cds location | 1..287 |
| est secis location | 382..489 |
| est dna sequence | CATGGATAGAGCAGTGGAGAGTTGCACTTGATGCGTGTGGATCCGATACCGATACAATTTTTGAACAGATGCGAACGACCAACCCCAAGTTTGTGCTCCGCGAGTGGATGCTAGTCGATGCGTACACAAGGGCGGCTGCCGGCGATGAATCTGACATGAGGAAGCTCTTTGAGCTGATTCAGCGGCCGTACGACGAGGGAACAAAAGATGAAATAAATCGATTTTACCGACGAGCCTCGGAAGAAGCACTTACGACCGGTGGGACCGCCTTTATGTCCTGATCCAGT TAA |
| est amino acid sequence | WIEQWRVALDACGSDTDTIFEQMRTTNPKFVLREWMLVDAYTRAAAGDESDMRKLFELIQRPYDEGTKDEINRFYRRASEEALTTGGTAFMSUSS * |
| est secis free energy | 0 |
| est secis sequence | AAGAAGUUGC GCUUACA CAGAUCAGAGUGA AUGAA AGCAAGAGGA AA AUCCAUGUCUAAAGCGAAGAAUGAA AGCCCUUGCU CGAC CAACC UGAUAAC AACUGUGCAA |