| id | 490 |
|---|---|
| protein family | SELENOO |
| protein name | Mi.co-SELENOO-1-U |
| species name | Micromonas commoda |
| seq length | 559 |
| cds location | 1704442..1705085,1705233..1706265 |
| secis location | 1706379..1706482 |
| dna sequence | GACCACAGCTGGACCAGGCACCTCAACCCCGATCCCGACACCGACGCCAACGCCCCCAACAGAAAGTCGCGGCAGGTGAAGAGCGGCCACTACGTCAGGGTCGATCCCACCCCGCTTCGCCAGCCCGAGACGGTGATTTACTCCCCGGACATGATCAAAAGGCTCGGCATCGACGAGGCGGACGTCAAGGCGCCCAACGGCGAGCGGTTCGCGCGGTTCTTCTCGGGCGACAAGTCCGCCGTACCCGGCATGGACACCTGGGCGACGCCGTACGCGCTCTCCATCATGGGTCAGAGGCAGGTGAGCAACTGCCCCTTCGGCACCGGCAACGGATACGGCGACGGGCGCGCCGTCTCCGTCGGCGAAGTCCTCGGCCCCGACGGCGTGCGGTGGGAGATGCAGCTCAAGGGCGGCGGGCCGACGCCGTTTTGCCGCGGCGCCGACGGCCGAGCGGTGCTCCGATCGTCCATTCGCGAGTTTTTAGCCTCTGAGGCGATGCACGCGCTGGGGGTGGACACGACGCGGGCGCTGTCGCTGGTGGTGTCCCGGGGCGGCGACGTGGCGCGCAGGCCGTGGTACGACCCTAACGCGGACAAGGACGCGTCCGCGGAGAGCATCTCGATGGACGATCCGAGGCTGGCGAGACGGGCGTCCAGAGCGGGCGCTGGGACGGCGCAGATGGACGAGCTGCGCAAGATGGTGCGACACGCGATTTTCCGCGAGTTTCCCGAGATTCTGAATGAATCCTCCGCGGGCGACGACGCCGACGACGGCGACGGGGACGTGACGCCCGAGCAAGTGGCCGCCTTCCTCGTGTCGTCGGGTGCCGCCATCGCCGACTTGGTGTGCGGGTGGCTCAGGGTTGGTTTCTGCCAGGGTAACTTCAACGCGGACAACTGCCTCGTGGGCGGCAGGACCATGGATTACGGACCTTTCGGATGGATGGACGCGTACGACCCCTTATTCGCCAAGTGGACCGGAAGCGGCGAGCACTTCGCGTTCATGAACCAGCCCGGCGCGGGGCTCGCCAATTTCGCGGTGCTCGCCGCGTCGTGCGCGCCGCTGCTGAAGGGTGGAGAGGACGAGGCGCAGGCCATCGTCGAGCGAATGCAGGGCGAGATGGAGCAAAAGGTGGCGGACGTGTGGCGTGTAAAGCTCGGTTTGCGGGAGTCGCAGCGCGCCGCCGCCGCCAAGCTCTTCGACTACAAGCTCGAGCCGCTGATGCGGGACAGTAACGTGGACTACACGTTGGTGTTCAGGCAGCTCGCGGAGTGCCTCAAGCTCCCACACGACGTCTCGGACGACGACCTGCTCGAGCCCCTCGCTTGCGCCTTTTACGACTCGCCAAACAACTTCTACGACGAGGGCACCAGGGCCAAGTGGTGCGACTTTGTGCGCTCCTGGAGGGACGAGGTCGCGGGTTCGAACCCCAACACGACCAGCACGATCGAGGCGATGAACAAGGTGAACCCGGCGTACGTGCTGCGCGAGTGGATGCTCGTCGACGCGTACACGGCGGCGAAGGAAAGAGACGATTTCTCGGTGCTCGAGGAGCTGTTCGAGCTGACGAGGACCCCGTACGAGCTCGGGAGCGAGACGATGCAGGAGAAGTACTACAGGCGCGCGCCGGACCGGGCGTTAAAGGCGGGAGGGACCGCGTTCATGTCCTGATCCTCG |
| amino acid sequence | DHSWTRHLNPDPDTDANAPNRKSRQVKSGHYVRVDPTPLRQPETVIYSPDMIKRLGIDEADVKAPNGERFARFFSGDKSAVPGMDTWATPYALSIMGQRQVSNCPFGTGNGYGDGRAVSVGEVLGPDGVRWEMQLKGGGPTPFCRGADGRAVLRSSIREFLASEAMHALGVDTTRALSLVVSRGGDVARRPWYDPNADKDASAESISMDDPRLARRASRAGAGTAQMDELRKMVRHAIFREFPEILNESSAGDDADDGDGDVTPEQVAAFLVSSGAAIADLVCGWLRVGFCQGNFNADNCLVGGRTMDYGPFGWMDAYDPLFAKWTGSGEHFAFMNQPGAGLANFAVLAASCAPLLKGGEDEAQAIVERMQGEMEQKVADVWRVKLGLRESQRAAAAKLFDYKLEPLMRDSNVDYTLVFRQLAECLKLPHDVSDDDLLEPLACAFYDSPNNFYDEGTRAKWCDFVRSWRDEVAGSNPNTTSTIEAMNKVNPAYVLREWMLVDAYTAAKERDDFSVLEELFELTRTPYELGSETMQEKYYRRAPDRALKAGGTAFMSUSS |
| secis free energy | 0 |
| secis sequence | CACACGGCGC GUCCCGG CGCCGGCGUUCGC GUGAC GCGGGGCGGCCA AA UGUCGAGUCAAUCGAC GGGCCGUUCCGU CGAU AUCCAA CGCCGGU GUGUGGGAAC |
| est id | gi|255074164|ref|XM_002500711.1| |
| est cds location | 43..1866 |
| est secis location | 1980..2083 |
| est dna sequence | ATGGACGCGGCTCCGTCCGTGCTCGGCCTCGCGGCACGCGCA GACCACAGCTGGACCAGGCACCTCAACCCCGATCCCGACACCGACGCCAACGCCCCCAACAGAAAGTCGCGGCAGGTGAAGAGCGGCCACTACGTCAGGGTCGATCCCACCCCGCTTCGCCAGCCCGAGACGGTGATTTACTCCCCGGACATGATCAAAAGGCTCGGCATCGACGAGGCGGACGTCAAGGCGCCCAACGGCGAGCGGTTCGCGCGGTTCTTCTCGGGCGACAAGTCCGCCGTACCCGGCATGGACACCTGGGCGACGCCGTACGCGCTCTCCATCATGGGTCAGAGGCAGGTGAGCAACTGCCCCTTCGGCACCGGCAACGGATACGGCGACGGGCGCGCCGTCTCCGTCGGCGAAGTCCTCGGCCCCGACGGCGTGCGGTGGGAGATGCAGCTCAAGGGCGGCGGGCCGACGCCGTTTTGCCGCGGCGCCGACGGCCGAGCGGTGCTCCGATCGTCCATTCGCGAGTTTTTAGCCTCTGAGGCGATGCACGCGCTGGGGGTGGACACGACGCGGGCGCTGTCGCTGGTGGTGTCCCGGGGCGGCGACGTGGCGCGCAGGCCGTGGTACGACCCTAACGCGGACAAGGACGCGTCCGCGGAGAGCATCTCGATGGACGATCCGAGGCTGGCGAGGTACCCGGATGACGTCAAACGGCAGATCATCCGGCAGTTCGCGAGCCAGAAGAGGGACCCGGACGTGATGATCGTGGAGACGTGCGCCATCACCACGCGCGTCGCGCCGTCGTTCACCAGAGTTGGGCACGTCGACCTGTTCGGCAGACGGGCGTCCAGAGCGGGCGCTGGGACGGCGCAGATGGACGAGCTGCGCAAGATGGTGCGACACGCGATTTTCCGCGAGTTTCCCGAGATTCTGAATGAATCCTCCGCGGGCGACGACGCCGACGACGGCGACGGGGACGTGACGCCCGAGCAAGTGGCCGCCTTCCTCGTGTCGTCGGGTGCCGCCATCGCCGACTTGGTGTGCGGGTGGCTCAGGGTTGGTTTCTGCCAGGGTAACTTCAACGCGGACAACTGCCTCGTGGGCGGCAGGACCATGGATTACGGACCTTTCGGATGGATGGACGCGTACGACCCCTTATTCGCCAAGTGGACCGGAAGCGGCGAGCACTTCGCGTTCATGAACCAGCCCGGCGCGGGGCTCGCCAATTTCGCGGTGCTCGCCGCGTCGTGCGCGCCGCTGCTGAAGGGTGGAGAGGACGAGGCGCAGGCCATCGTCGAGCGAATGCAGGGCGAGATGGAGCAAAAGGTGGCGGACGTGTGGCGTGTAAAGCTCGGTTTGCGGGAGTCGCAGCGCGCCGCCGCCGCCAAGCTCTTCGACTACAAGCTCGAGCCGCTGATGCGGGACAGTAACGTGGACTACACGTTGGTGTTCAGGCAGCTCGCGGAGTGCCTCAAGCTCCCACACGACGTCTCGGACGACGACCTGCTCGAGCCCCTCGCTTGCGCCTTTTACGACTCGCCAAACAACTTCTACGACGAGGGCACCAGGGCCAAGTGGTGCGACTTTGTGCGCTCCTGGAGGGACGAGGTCGCGGGTTCGAACCCCAACACGACCAGCACGATCGAGGCGATGAACAAGGTGAACCCGGCGTACGTGCTGCGCGAGTGGATGCTCGTCGACGCGTACACGGCGGCGAAGGAAAGAGACGATTTCTCGGTGCTCGAGGAGCTGTTCGAGCTGACGAGGACCCCGTACGAGCTCGGGAGCGAGACGATGCAGGAGAAGTACTACAGGCGCGCGCCGGACCGGGCGTTAAAGGCGGGAGGGACCGCGTTCATGTCCTGATCCTCG TAG |
| est amino acid sequence | MDAAPSVLGLAARA DHSWTRHLNPDPDTDANAPNRKSRQVKSGHYVRVDPTPLRQPETVIYSPDMIKRLGIDEADVKAPNGERFARFFSGDKSAVPGMDTWATPYALSIMGQRQVSNCPFGTGNGYGDGRAVSVGEVLGPDGVRWEMQLKGGGPTPFCRGADGRAVLRSSIREFLASEAMHALGVDTTRALSLVVSRGGDVARRPWYDPNADKDASAESISMDDPRLARYPDDVKRQIIRQFASQKRDPDVMIVETCAITTRVAPSFTRVGHVDLFGRRASRAGAGTAQMDELRKMVRHAIFREFPEILNESSAGDDADDGDGDVTPEQVAAFLVSSGAAIADLVCGWLRVGFCQGNFNADNCLVGGRTMDYGPFGWMDAYDPLFAKWTGSGEHFAFMNQPGAGLANFAVLAASCAPLLKGGEDEAQAIVERMQGEMEQKVADVWRVKLGLRESQRAAAAKLFDYKLEPLMRDSNVDYTLVFRQLAECLKLPHDVSDDDLLEPLACAFYDSPNNFYDEGTRAKWCDFVRSWRDEVAGSNPNTTSTIEAMNKVNPAYVLREWMLVDAYTAAKERDDFSVLEELFELTRTPYELGSETMQEKYYRRAPDRALKAGGTAFMSUSS * |
| est secis free energy | 0 |
| est secis sequence | CACACGGCGC GUCCCGG CGCCGGCGUUCGC GUGAC GCGGGGCGGCCA AA UGUCGAGUCAAUCGAC GGGCCGUUCCGU CGAU AUCCAA CGCCGGU GUGUGGGAAC |