| id | 187 |
|---|---|
| protein family | SELENOT |
| protein name | Ch.va-SELENOT-1-U |
| species name | Chlorella variabilis |
| seq length | 146 |
| cds location | 655235..654935,654747..654611 |
| secis location | 646355..646258 |
| dna sequence | GTGCTCCTCTCCTTCTGCGTCAGCTGATCCTTCAAAGGCGCTGCGTTGCAAGTGCAACAAGCGCTGAAGAACCACTTTGGGCAGTCGCTGCCCGTCACCCTAGTCAACCACCCGCCGCCGCCCACCCAGGCGCTGCTGGCCCAGCTGGTGCTCCTGACGCAGTTTGTGCTGGCGGCCGTGGTGCTGTCAGGGCCGCAGGCCGCGCCGTACCTGGCTCGTATAGGCATCGTGCTTCCGCCCGAGACCTGGCAGGCTGTGCAGGAGAAGAAGGTCGGCATCCTCATGGGAGCCTGGTTCATCGGCAACACGGTCCGCCAAAACCTGCTGGGGACGGGCGCCTTTGAAGTCTCCTACGATGGCACCCCGATCTTCTCCAAGCTAGACACAGGGCGCATGCCTACTCTGCCCGAGCTGGTCGCCGGCATCGCCGAGGCAATG |
| amino acid sequence | VLLSFCVSUSFKGAALQVQQALKNHFGQSLPVTLVNHPPPPTQALLAQLVLLTQFVLAAVVLSGPQAAPYLARIGIVLPPETWQAVQEKKVGILMGAWFIGNTVRQNLLGTGAFEVSYDGTPIFSKLDTGRMPTLPELVAGIAEAM |
| secis free energy | -28.5 |
| secis sequence | GGGCCAGGUG GGCGCGG GUCUUGCGCUCCG CUGAC GUGGCGCAGC CC AUGCGCAGCGCACGCA GCAGCUCCC AGGAA GGCG CCCCGCU GGCGUGCAGG |
| est id | gi|208925109|gb|GE260751.1|GE260751 |
| est cds location | 170..607 |
| est secis location | |
| est dna sequence | ATGCCCGCCGCGCAGCTAAGCGCGGCGCAGGAGACTGCTCCCACCGCCCCAAGCGGC GTGCTCCTCTCCTTCTGCGTCAGCTGATCCTTCAAAGGCGCTGCGTTGCAAGTGCAACAAGCGCTGAAGAACCACTTTGGGCAGTCGCTGCCCGTCACCCTAGTCAACCACCCGCCGCCGCCCACCCAGGCGCTGCTGGCCCAGCTGGTGCTCCTGACGCAGTTTGTGCTGGCGGCCGTGGTGCTGTCAGGGCCGCAGGCCGCGCCGTACCTGGCTCGTATAGGCATCGTGCTTCCGCCCGAGACCTGGCAGGCTGTGCAGGAGAAGAAGGTCGGCATCCTCATGGGAGCCTGGTTCATCGGCAACACGGTCCGCCAAAACCTGCTGGGGACGGGCGCCTTTGAAGTCTCCTACGATGGCACCCCGATCTTCTCCAAGCTAGACACAGGGCGCATGCCTACTCTGCCCGAGCTGGTCGCCGGCATCGCCGAGGCAATG GCGGCTGCCGGCAACCCCGCAGGCAGTGGCACCGAGCAGTAG |
| est amino acid sequence | MPAAQLSAAQETAPTAPSG VLLSFCVSUSFKGAALQVQQALKNHFGQSLPVTLVNHPPPPTQALLAQLVLLTQFVLAAVVLSGPQAAPYLARIGIVLPPETWQAVQEKKVGILMGAWFIGNTVRQNLLGTGAFEVSYDGTPIFSKLDTGRMPTLPELVAGIAEAM AAAGNPAGSGTEQ* |
| est secis free energy | 0 |
| est secis sequence |