| id | 177 |
|---|---|
| protein family | MSP |
| protein name | Ch.re-MSP-1-U |
| species name | Chlamydomonas reinhardtii |
| seq length | 211 |
| cds location | 4629853..4629918,4630300..4630420,4630577..4630703,4631636..4631883,4632214..4632284 |
| secis location | 4634778..4634877 |
| dna sequence | ATGCCCCCGCTGGCAGTACGTCGCCGTCTCGCGGAGCAGGCTGCAGCTCAAGCTGATGCTGACGAGGTCGCGTCCGAGTTGTCGGATGACGAGCTCCCGGATCAGAAGAGCCTGGCCTCCTCCATAGCGGCGCTACTGCTGGTCCTGCCCGCGCTAGTGGGCAGCTGATGTTGGCCCCTCCTGCTGGCTGGCTTTATGGGAATTACTGCCACAGCAGGCGCCAAGGCTTTCTCTCACACGTTTTCTCTAGCTCTCACCGCCGTCATCCTGACCAATCTGGCCCAGTACACGGCCTGGAAGGGATTGTCACACGGGACCGTCGGCGCGAGGATGCAGCGCATGACGACATGCACCCACACATGCGCACGCGCTCTCTCAAACAAGCCCTCGCGCGCAACCCCACACGCACAGGACGCGGGGGTGTGGACCGGGCCGTCCAGCCGCATGTACCGCGACGACTGCAGCCCCGTCACCGGCCTGCACGGCTTCTACTGCCTGTCGCTCACCGGCTGGGTGTTCTCCATCTTCTGCACCTACACCGGCTTCGTGCTCATGATTGTGTCGGTGTTCTGGAGCTCGAAGATCATGCACAAGCTCCGCCACGCCTGGCACCACATCCACCTCGCCCGCCGC |
| amino acid sequence | MPPLAVRRRLAEQAAAQADADEVASELSDDELPDQKSLASSIAALLLVLPALVGSUCWPLLLAGFMGITATAGAKAFSHTFSLALTAVILTNLAQYTAWKGLSHGTVGARMQRMTTCTHTCARALSNKPSRATPHAQDAGVWTGPSSRMYRDDCSPVTGLHGFYCLSLTGWVFSIFCTYTGFVLMIVSVFWSSKIMHKLRHAWHHIHLARR |
| secis free energy | -15.5 |
| secis sequence | UGAAAAACAA CUCGCUA CAGCAC UUGAC AGGUACAUAA AA UUGGGCUUUUGGGUCCGGA UUGGGUCCC GGGAC UGGCCUGCUU CAGCGCA CCCCACGCCU |
| est id | gi|161812625|gb|FC094255.1|FC094255,gi|8576832|gb|BE129469.1|BE129469,gi|22050021|gb|BQ809030.1|BQ809030,gi|16436932|gb|BM002152.1|BM002152,gi|15692722|gb|BI717027.1|BI717027,gi|49464442|gb|BP092355.1|BP092355,gi|7413286|gb|AW652040.1|AW652040,gi|7616076| |
| est cds location | 182..808 |
| est secis location | 850..953 |
| est dna sequence | ATGCCCCCGCTGGCAGTACGTCGCCGTCTCGCGGAGCAGGCTGCAGCTCAAGCTGATGCTGACGAGGTCGCGTCCGAGTTGTCGGATGACGAGCTCCCGGATCAGAAGAGCCTGGCCTCCTCCATAGCGGCGCTACTGCTGGTCCTGCCCGCGCTAGTGGGCAGCTGATGTTGGCCCCTCCTGCTGGCTGGCTTTATGGGAATTACTGCCACAGCAGGCGCCAAGGCTTTCTCTCACACGTTTTCTCTAGCTCTCACCGCCGTCATCCTGACCAATCTGGCCCAGTACACGGCCTGGAAGGGATTGTCACACGGCGGCACGCACTGGCACCGCTACGGCCCGGCCTACCTGCTGGTCGTGGCCACGCCGCTGCTGCTGGCGGACCTCACGCGGCACTCGCTGCAGGACGCGGGGGTGTGGACCGGGCCGTCCAGCCGCATGTACCGCGACGACTGCAGCCCCGTCACCGGCCTGCACGGCTTCTACTGCCTGTCGCTCACCGGCTGGGTGTTCTCCATCTTCTGCACCTACACCGGCTTCGTGCTCATGATTGTGTCGGTGTTCTGGAGCTCGAAGATCATGCACAAGCTCCGCCACGCCTGGCACCACATCCACCTCGCCCGCCGC TAA |
| est amino acid sequence | MPPLAVRRRLAEQAAAQADADEVASELSDDELPDQKSLASSIAALLLVLPALVGSUCWPLLLAGFMGITATAGAKAFSHTFSLALTAVILTNLAQYTAWKGLSHGGTHWHRYGPAYLLVVATPLLLADLTRHSLQDAGVWTGPSSRMYRDDCSPVTGLHGFYCLSLTGWVFSIFCTYTGFVLMIVSVFWSSKIMHKLRHAWHHIHLARR * |
| est secis free energy | 0 |
| est secis sequence | GCGGGCGCAG UGGGUGU GUGACUAUUCAUC AUGAG GCGUAAUUCAAGG AA CAGGGCGAUGGCAGCAG UAUGGGGGUUGCU CGAG AGGC GCGAUU CAUGGCUUGC
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